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trend a platform for exploring protein function

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TREND is a highly customizable computational platform that allows researchers to explore protein function identifying protein features, gene neighborhoods and operons, clustering neighboring genes, and integrating all these data into phylogenomic context and cross-referencing with RefSeq, Pfam, CDD and MiST databases.Apr 13, 2020
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PDF | Key steps in a computational study of protein function involve analysis of (i) relationships between homologous proteins, (ii) protein domain.
Abstract Key steps in a computational study of protein function involve analysis of (i) relationships between homologous proteins, (ii) protein domain ...
Apr 13, 2020 — Key steps in a computational study of protein function involve analysis of (i) relationships between homologous proteins, (ii) protein ...
Searching for regularities in protein evolution... · Align protein sequences and build a tree · Identify protein domain architectures · Identify gene neighborhoods.
Missing: platformfunction
Insertions and deletions (indels) are known to affect function, biophysical properties and substrate specificity of enzymes, and they play a central role in evolution ...
Aug 26, 2020 — The surface of proteins is vital in determining protein functions. Herein, a program, Protein Surface Printer (PSP), is built that performs ...
Proteomics is the large-scale study of proteins. Proteins are vital parts of living organisms, with many functions. ... It covers the exploration of proteomes from the overall level of protein ...
by S BarloweCited by 4 — Deciphering how a protein's function changes as its three- ... ery in protein flexibility outputs, a framework called WaveMap.
TREND: a platform for exploring protein function in prokaryotes based on phylogenetic, domain architecture and gene neighborhood analyses. VM Gumerov, IB ...

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